Sudheer Sahu, Peng Yin, & John H. Reif (2005) A Self-Assembly Model of Time-Dependent Glue Strength.  Eleventh International Meeting on DNA Computing (DNA11), London, Canada, June 6-9, 2005.

Sungha Park, Peng Yin, Yan Liu, John H. Reif, Thomas H. LaBean, & Hao Yan (2005) Programmable DNA Self-Assemblies for Nanoscale Organization of Ligands and Proteins. Nano Lett., 5, April 2005. pp. 729 - 733.

Peng Yin & Alexander J. Hartemink (2005) Theoretical and Practical Advances in Genome Halving. Bioinformatics, 21, April 2005. pp. 869–879. 

Pankaj K. Agarwal, Yusu Wang, & Peng Yin (2005) Lower Bound for Sparse Euclidean Spanners. ACM-SIAM Symposium on Discrete Algorithms, January 2005 (SODA'05). pp. 670-671.

Peng Yin, Hao Yan, Xiaoju G. Daniell, Andrew J. Turberfield, & John H. Reif (2004) A Unidirectional DNA Walker Moving Autonomously Along a Linear Track. Angew. Chem. Int. Ed. 43, September 2004. pp. 4906-4911.

Peng Yin, Andrew J. Turberfield, & John H. Reif (2004) Designs of Autonomous Unidirectional Walking DNA Devices. Tenth International Meeting on DNA Computing (DNA10), Milano, Italy, June 7-10, 2004. Lecture Notes in Computer Science (to appear 2005).

Peng Yin, Andrew J. Turberfield, Sudheer Sahu, & John H. Reif (2004) Design of an Autonomous DNA Nanomechanical Device Capable of Universal Computation and Universal Translational Motion. Tenth International Meeting on DNA Computing (DNA10), Milano, Italy, June 7-10, 2004. Lecture Notes in Computer Science (to appear 2005).

John H. Reif, Sudheer Sahu, & Peng Yin (2004) Compact Error-Resilient Computational DNA Tiling Assemblies. Tenth International Meeting on DNA Computing (DNA10), Milano, Italy, June 7-10, 2004. Lecture Notes in Computer Science (to appear 2005).  Also appeared as invited paper in Foundations of Nanoscience 2004 (FNANO04).

Hao Yan, Peng Yin, Sung Ha Park, Hanying Li, Liping Feng, Xiaoju Guan, Dage Liu, John H. Reif, & Thomas H. LaBean (2004) Self-assembled DNA Structures for Nanoconstruction. International Symposium on DNA-Based Molecular Electronics, Jena, Germany, May, 2004. Fritzsche, W. eds. AIP Conference Proceedings, 725, American Institute of Physics. pp. 43-52.

John H. Reif, Thomas H. LaBean, Sudheer Sahu, Hao Yan, & Peng Yin (2004) Design, Simulation, and Experimental Demonstration of Self-Assembled DNA Nanostructures and DNA Motors. Unconventional Programming Paradigms (UPP), September 2004, Lecture Notes in Computer Science (to appear 2005).

Thomas H. LaBean, Hao Yan, Sung Ha Park, Liping Feng, Peng Yin, Hanying Li, Sang Jung Ahn, Dage Liu, Xiaoju Guan, & John H. Reif (2004) Overview of New Structures for DNA-Based Nanofabrication and Computation. Invited paper to Information Sciences. (to appear 2004).